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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912941.1_cds_XP_016463016.1_56180
CDS Infomation

[gene=LOC107786094] [db_xref=GeneID:107786094] [protein=probable 2-oxoglutarate-dependent dioxygenase AOP1] [protein_id=XP_016463016.1] [location=complement(join(10489..10743,10826..11147,11496..11872))] [gbkey=CDS]
Sequence

ATGGGTTCTTTAACAGCTTCACCACAATTACTAGTAGTAAACTTCAATAATGAAGAACTA
AGACCAGGCACAGCCACTTGGGAATCTACATGTAAAGAAATCAGGTTTGCCTTTGAAAAC
CATGGCAGCTTTATAGCACTTTATGACAAAATCTCACCCCAACTTCAAAAATCCATTTTT
CAAGCTTCCCAACAATTATTTGAGCTCCCTTTAGAGAAAAAAGTCCTAAATACCAATGAA
AAACCTTATCATGGTTATGTTGGCCAAATTCCATTTCTACCTCATCATGAAGCTTTTGGC
ATTGACTATGCAACTACTTCTCAAGGTATTCAAAGCTTTTCCAACCTCATGTGGCCTCAA
GGAAACGACTTTTTTGGTGAGAATTCGTTGATGTTTTCAAAGATTGTGGCGGAGTTGGAC
CAGAAAGTTGTAAGAATGCTATTTGAAAGCTATGGAATAGGGAAAAACTGCGAATCGTAC
CTTGAATCAACCACGTATCTACTTCGATACCTGAAATATGACGCACCAAATACAAAGGAA
AATAGTATGGTTTTCCCCCCACATACTGATAAAACATTCACGACCATACTATATCAAAAT
CGCATTTCAGGCTTGGAAGTTCAAACTCGAGATGGACAATGGATAAATATGGAGTTCCCA
CCCTCTTCTTTTGTAGTCATGGCTGGTGAAGCATGCAGAGGTTGGAGCAATGATCGCGTT
CTTACGCCTGTCCATAAGGTGATTATGGATATAAGTGGGAATGAAACAAGATACACTGTT
GGAATATTTACTTTTCTAAAGGATGATAAAATGATAGAAGTAGCAGAAGAACTAGTTGAT
GAAGAACATCCATTGCAGTTTAAGCCATTTGTTCATATAGATTTGATCAAGTTTTTTGAC
ACAGAACGTGGTCGGAGATCGCAGGATTTACTCAAAGACTTCTGTGGTGTTTAA

Peptide Sequence

PEP ID

XP_016463016.1
PEP Infomation

PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Nicotiana tabacum]
Sequence

MGSLTASPQLLVVNFNNEELRPGTATWESTCKEIRFAFENHGSFIALYDKISPQLQKSIF
QASQQLFELPLEKKVLNTNEKPYHGYVGQIPFLPHHEAFGIDYATTSQGIQSFSNLMWPQ
GNDFFGENSLMFSKIVAELDQKVVRMLFESYGIGKNCESYLESTTYLLRYLKYDAPNTKE
NSMVFPPHTDKTFTTILYQNRISGLEVQTRDGQWINMEFPPSSFVVMAGEACRGWSNDRV
LTPVHKVIMDISGNETRYTVGIFTFLKDDKMIEVAEELVDEEHPLQFKPFVHIDLIKFFD
TERGRRSQDLLKDFCGV

Transcript Sequence

Gene sequence data has not been registered.